Importing and simulating data.- Data checking.- Single-QTL analysis.- Non-normal phenotypes.- Experimental design and power.- Working with covariates.- Two-dimensional, two-QTL scans.- Fit and exploration of multiple-QTL models.- Case study I.- Case study II.
Comprehensive discussion of QTL mapping concepts and theory
Detailed instructions on the use of the R/qtl software, the most featured and flexible software for QTL mapping
Two case studies illustrate QTL analysis in its entirety
Gives an overview of the practical aspects of the analysis of QTL mapping experiments based on inbred line crosses, with explicit instructions on the use of the R/qtl software